- Title Information
- Title
- A CRISPR-based strategy for targeted sequencing in biodiversity science
- Type of Resource (primo)
- other
- Abstract
- The bioinformatic steps taken for experiments 1-6 in "A CRISPR-based strategy for targeted sequencing in biodiversity science" by Littleford-Colquhoun & Kartzinel 2023.
These bioinformatic steps taken for each experiment include:
1) Adapter trimming quality (Q>=8) Nanopore sequence reads using Porechop
2) Error correcting trimmed reads using Canu
3) Assembling contigs using Flye
- Name
- Name Part
- Littleford-Colquhoun, Bethan
- Role
- Role Term (marcrelator)
(authorityURI="http://id.loc.gov/vocabulary/relators", valueURI="http://id.loc.gov/vocabulary/relators/cre")
- Creator
- Name
- Name Part
- Kartzinel, Tyler
- Role
- Role Term (marcrelator)
(authorityURI="http://id.loc.gov/vocabulary/relators", valueURI="http://id.loc.gov/vocabulary/relators/cre")
- Creator
- Origin Information
- Date Created
- 2023-06-30
- Subject (Local)
- Topic
- metagenomics
- Subject (Local)
- Topic
- amplicon sequencing
- Subject (Local)
- Topic
- barcoding
- Subject (Local)
- Topic
- Cas9
- Subject (Local)
- Topic
- environmental DNA
- Subject (Local)
- Topic
- guide RNA
- Subject (Local)
- Topic
- metabarcoding
- Subject (Local)
- Topic
- long-read sequencing
- Subject (Local)
- Topic
- contigs
- Subject (Local)
- Topic
- Flye
- Genre
- Bioinformatic pipeline
- Access Condition:
use and reproduction
(href="http://creativecommons.org/publicdomain/zero/1.0/legalcode")
- CC0 1.0 Universal (CC0 1.0)
- Access Condition:
logo
(href="https://licensebuttons.net/l/zero/1.0/88x31.png")
- Access Condition:
rights statement
(href="http://rightsstatements.org/vocab/NoC-US/1.0/")
- No Copyright - United States
- Identifier:
DOI
- 10.26300/m1kr-3q85