The simulation output and code required to reproduce model parameters and the tables and figures underlying the analysis are contained in this repository. An aggregated clinic dataset has been provided to preserve patient confidentiality concerns. The original data is available upon request to Philip A. Chan (philip_chan@brown.edu). In some cases, simulation analysis code relies on data from publicly available sources, and the filters required to retrieve or reproduce those data are provided in the relevant folders. The ABM model code itself is particular to this analysis and does not reflect subsequent development, documentation, and improvement. Please see the accompanying publication: Gantenberg JR, King M, Montgomery MC, Galárraga O, Prosperi M, Chan PA, and Marshall BDL. (2018) Improving the impact of HIV pre-exposure prophylaxis implementation in small urban centers among men who have sex with men: An agent-based modelling study. PLoS ONE 13(7): e0199915. https://doi.org/10.1371/journal.pone.0199915
Notes:
This work was supported by the National Institutes of Mental Health (R21MH109360, co-PIs: Brandon D.L. Marshall, Philip A. Chan). Brandon D.L. Marshall is further supported by the National Institute on Drug Abuse (DP2DA040236). Additional support was provided by the Providence/Boston Center for AIDS Research, funded by the National Institute of Allergy and Infectious Diseases (P30AI042853). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
This work is licensed under a Creative Commons Attribution 4.0 International License
Citation
Gantenberg, Jason R., King, Maximilian, Montgomery, Madeline, et al.,
"Model simulation output and analysis code"
(2018).
Brown University Open Data Collection.
Brown Digital Repository. Brown University Library.
https://doi.org/10.7301/Z0VQ317R
This collection contains open and publicly-funded data sets created by Brown University faculty and student researchers. Increasingly, publishers, and funders are requiring that protocols, data sets, metadata, and code underlying published research be retained and preserved, their locations cited within …
