SFHERE Publications and Presentations

This collection houses journal articles, conference papers and presentations, and abstracts and posters authored by members of the SFHERE team.

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Items (1-20) out of 24 results

An analysis of free-text alcohol use documentation in the electronic health record

Description:: Background: Alcohol use is a significant part of a patient's history, but details about consumption are not always documented. Electronic Health Record (EHR) systems have …
Year:: 2014
Contributor:: Chen, Elizabeth S. (author); Garcia-Webb, M. (author)
Genre:: papers (documents)
Subject:: Alcohol use
Collection:: SFHERE Project; SFHERE Publications and Presentations

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Analyzing operative note structure in development of a section header resource

Thumbnail for Analyzing operative note …

Description:: Operative notes contain essential details of surgical procedures and are an important form of clinical documentation. Sections within operative notes segment provide high level note …
Year:: 2015
Contributor:: Melton, Genevieve B. (author); Wang, Yan (author); Arsoniadis, Elliot (author); Pakhomov, Serguei (author); Adam, Terrence J. (author); Kwaan, Mary R. (author); Rothenberger, David A. (author); Chen, Elizabeth S. (author)
Genre:: papers (documents)
Collection:: SFHERE Project; SFHERE Publications and Presentations

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Application of HL7/LOINC document ontology to a university-affiliated integrated health system research clinical data repository

Thumbnail for Application of HL7/LOINC …

Description:: Fairview Health Services is an affiliated integrated health system partnering with the University of Minnesota to establish a secure research-oriented clinical data repository that includes …
Year:: 2014
Contributor:: Wang, Yan (author); Pakhomov, Serguei (author); Dale, Justin L. (author); Chen, Elizabeth S. (author); Melton, Genevieve B. (author)
Genre:: papers (documents)
Collection:: SFHERE Project; SFHERE Publications and Presentations

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Assessing the adequacy of the HL7/LOINC document ontology role axis

Description:: The healthcare landscape is changing, driven by innovative care models and the emergence of new roles that are inter-professional in nature. Currently, the HL7/LOINC Document …
Year:: 2015
Contributor:: Rajamani, Sripriya (author); Chen, Elizabeth S. (author); Akre, Mari E. (author); Wang, Yan (author); Melton, Genevieve B. (author)
Genre:: papers (documents)
Collection:: SFHERE Project; SFHERE Publications and Presentations

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Automated extraction of family history information from clinical notes

Description:: Despite increased functionality for obtaining family history in a structured format within electronic health record systems, clinical notes often still contain this information. We developed …
Year:: 2014
Contributor:: Bill, Robert (author); Pakhomov, Serguei (author); Chen, Elizabeth S. (author); Winden, Tamara J. (author); Carter, Elizabeth W. (author); Melton, Genevieve B. (author)
Genre:: papers (documents)
Subject:: Family history
Collection:: SFHERE Project; SFHERE Publications and Presentations

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Automated extraction of substance use information from clinical texts

Description:: Within clinical discourse, social history (SH) includes important information about substance use (alcohol, drug, and nicotine use) as key risk factors for disease, disability, and …
Year:: 2015
Contributor:: Wang, Yan (author); Chen, Elizabeth S. (author); Pakhomov, Serguei (author); Arsoniadis, Elliot (author); Carter, Elizabeth W. (author); Lindemann, Elizabeth (author); Sarkar, Indra Neil (author); Melton, Genevieve B. (author)
Genre:: papers (documents)
Subject:: Tobacco use; Alcohol use
Collection:: SFHERE Project; SFHERE Publications and Presentations

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Automated extraction of substance use information from clinical texts

Description:: Within clinical discourse, social history (SH) includes important information about substance use (alcohol, drug, and nicotine use) as key risk factors for disease, disability, and …
Year:: 2015
Contributor:: Wang, Yan (author); Chen, Elizabeth S. (author); Arsoniadis, Elliot (author); Carter, Elizabeth W. (author); Lindemann, Elizabeth (author); Sarkar, Indra Neil (author); Melton, Genevieve B. (author)
Genre:: papers (documents)
Subject:: Drug use; Alcohol use; Tobacco use
Collection:: SFHERE Project; SFHERE Publications and Presentations

Full Record

Automated extraction of substance use information from clinical texts

Description:: Within clinical discourse, social history (SH) includes important information about substance use (alcohol, drug, and nicotine use) as key risk factors for disease, disability, and …
Year:: 2015
Contributor:: Wang, Yan (author); Chen, Elizabeth S. (author); Arsoniadis, Elliot (author); Carter, Elizabeth W. (author); Lindemann, Elizabeth (author); Sarkar, Indra Neil (author); Melton, Genevieve B. (author)
Genre:: papers (documents)
Subject:: Drug use; Alcohol use; Tobacco use
Collection:: SFHERE Project; SFHERE Publications and Presentations

Full Record

Content analysis of patient-driven family health history tools

Description:: A patient's family health history (FHH) can be a valuable guide to identifying inherited factors, assessing disease risk, and enhancing patient care through support of …
Year:: 2013
Contributor:: Carter, Elizabeth W. (author); Melton, Genevieve B. (author); Chen, Elizabeth S. (author)
Subject:: Family history
Collection:: SFHERE Project; SFHERE Publications and Presentations

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Development of a comprehensive family health history information model

Description:: In the last five years, there has been increasing emphasis on the importance of family health history (FHH) and the need for improved collection and …
Year:: 2013
Contributor:: Chen, Elizabeth S. (author); Carter, Elizabeth W. (author); Winden, Tamara J. (author); Sarkar, Indra Neil (author); Melton, Genevieve B. (author)
Subject:: Family history
Collection:: SFHERE Project; SFHERE Publications and Presentations

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Enabling use of high performance computing for secure processing of protected health information

Description:: Analyzing large clinical note collections using natural language processing (NLP) requires computational resources in excess of that typically available internal to academic health centers. External …
Year:: 2015
Contributor:: Bill, Robert (author); Melton, Genevieve B. (author); Gottschalk, Bart (author); Ring, Andrew (author); Dale, Justin L. (author); Viñals, Jorge (author); Lamblin, Anne-Francoise (author); Pakhomov, Serguei (author)
Collection:: SFHERE Project; SFHERE Publications and Presentations

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Evaluating living situation, occupation, and hobby/activity information in the electronic health record

Thumbnail for Evaluating living situation, …

Description:: Social and individual behavioral factors play an important role in diagnosis, prevention, heal outcomes, and quality of life. As defined by the World Health Organization, …
Year:: 2014
Contributor:: Winden, Tamara J. (author); Chen, Elizabeth S. (author); Lindemann, Elizabeth (author); Wang, Yan (author); Carter, Elizabeth W. (author); Melton, Genevieve B. (author)
Subject:: Living situation; Occupation
Collection:: SFHERE Project; SFHERE Publications and Presentations

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Examining the use, contents, and quality of free-text tobacco use documentation in the electronic health record

Description:: Recent initiatives have emphasized the potential role of Electronic Health Record (EHR) systems for improving tobacco use assessment and cessation. In support of these efforts, …
Year:: 2014
Contributor:: Chen, Elizabeth S. (author); Carter, Elizabeth W. (author); Sarkar, Indra Neil (author); Winden, Tamara J. (author); Melton, Genevieve B. (author)
Genre:: papers (documents)
Subject:: Tobacco use
Collection:: SFHERE Project; SFHERE Publications and Presentations

Full Record

Extending the HL7/LOINC document ontology settings of care

Description:: Given federal mandates recommending document standards, increasing numbers of electronic clinical documents being created, and local initiatives/projects using clinical documents, there is a growing need …
Year:: 2014
Contributor:: Rajamani, Sripriya (author); Chen, Elizabeth S. (author); Wang, Yan (author); Melton, Genevieve B. (author)
Genre:: papers (documents)
Collection:: SFHERE Project; SFHERE Publications and Presentations

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Mining and visualizing family history associations in the electronic health record: a case study for pediatric asthma

Description:: Asthma is the most common chronic childhood disease and has seen increasing prevalence worldwide. While there is existing evidence of familial and other risk factors …
Year:: 2015
Contributor:: Chen, Elizabeth S. (author); Melton, Genevieve B. (author); Wasserman, Richard C. (author); Rosenau, Paul T. (author); Howard, Diantha B. (author); Sarkar, Indra Neil (author)
Genre:: papers (documents)
Subject:: Family history
Collection:: SFHERE Project; SFHERE Publications and Presentations

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Mining the electronic health record for disease knowledge

Description:: The growing amount and availability of electronic health record (EHR) data present enhanced opportunities for discovering new knowledge about diseases. In the past decade, there …
Year:: 2014
Contributor:: Chen, Elizabeth S. (author); Sarkar, Indra Neil (author)
Collection:: SFHERE Project; SFHERE Publications and Presentations

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Multi-source development of an integrated model for family health history

Thumbnail for Multi-source development of …

Description:: Objective: To integrate data elements from multiple sources for informing comprehensive and standardized collection of family health history (FHH). Materials and methods: Three types of …
Year:: 2015
Contributor:: Chen, Elizabeth S. (author); Carter, Elizabeth W. (author); Winden, Tamara J. (author); Sarkar, Indra Neil (author); Wang, Yan (author); Melton, Genevieve B. (author)
Genre:: papers (documents)
Subject:: Family history
Collection:: SFHERE Project; SFHERE Publications and Presentations

Full Record

PubMedMiner: mining and visualizing MeSH-based associations in PubMed

Description:: The exponential growth of biomedical literature provides the opportunity to develop approaches for facilitating the identification of possible relationships between biomedical concepts. Indexing by Medical …
Year:: 2014
Contributor:: Zhang, Yucan (author); Sarkar, Indra Neil (author); Chen, Elizabeth S. (author)
Genre:: papers (documents)
Collection:: SFHERE Project; SFHERE Publications and Presentations

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Representation of drug use in biomedical standards, clinical text, and research measures

Description:: Drug misuse is a prominent cause of morbidity and mortality in the United States. Recent focus on behavioral and social domains in the electronic health …
Year:: 2015
Contributor:: Carter, Elizabeth W. (author); Sarkar, Indra Neil (author); Melton, Genevieve B. (author); Chen, Elizabeth S. (author)
Genre:: papers (documents)
Subject:: Drug use
Collection:: SFHERE Project; SFHERE Publications and Presentations

Full Record

Representation of drug use in biomedical standards, clinical text, and research measures

Description:: Drug misuse is a prominent cause of morbidity and mortality in the United States. Recent focus on behavioral and social domains in the electronic health …
Year:: 2015
Contributor:: Carter, Elizabeth W. (author); Sarkar, Indra Neil (author); Melton, Genevieve B. (author); Chen, Elizabeth S. (author)
Genre:: papers (documents)
Subject:: Drug use
Collection:: SFHERE Project; SFHERE Publications and Presentations

Full Record

SFHERE Publications and Presentations

Refine your results

Year

Type of Document

Factors

Source

Method

Condition

Factors

Items

Items (1-20) out of 24 results

Items (1-20) out of 24 results

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